STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_01370Iron only hydrogenase large subunit. (605 aa)    
Predicted Functional Partners:
SYN_01369
NADH-quinone oxidoreductase chain F.
 
 
 0.990
SYN_01648
NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD.
 
 
 0.988
SYN_02426
NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD.
 
 
 0.988
SYN_02139
NADH-quinone oxidoreductase chain F.
 
 
 0.980
SYN_00631
NADH-quinone oxidoreductase chain F.
 
 
 0.976
SYN_02058
4Fe-4S binding protein.
  
 
 0.974
SYN_00152
NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD.
 
 
 0.965
SYN_02137
Formate dehydrogenase, iron-sulfur subunit.
 
0.949
SYN_00630
Formate dehydrogenase, iron-sulfur subunit.
 
0.948
SYN_01629
Glutamate synthase (NADPH).
  
 
 0.945
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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