STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_01465Signal transduction histidine kinase. (415 aa)    
Predicted Functional Partners:
SYN_01466
Sigma-54 dependent transcriptional regulator.
 
 
 0.919
SYN_00970
Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
      0.849
SYN_00875
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
   
 0.811
SYN_01292
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 
 0.810
SYN_00230
Response regulator receiver domain and a sigma factor phosphatase domain.
   
 0.805
SYN_01078
Response regulator receiver domain.
  
 
 
 0.801
SYN_00981
Response regulator with a winged-helix DNA-binding domain.
 
 
 
 0.798
SYN_02258
cheY-like receiver domain protein.
 
 0.783
SYN_01079
Ggdef family protein / response regulator receiver domain.
 
 
 0.767
SYN_02576
Signal transduction histidine kinase.
 
 
 
0.764
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.