STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_01672Molybdopterin dependent oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (683 aa)    
Predicted Functional Partners:
SYN_02219
Ni/Fe hydrogenase beta subunit.
   
 
 0.917
SYN_02221
Nickel-dependent hydrogenase, small chain.
     
 0.916
SYN_02222
Nickel-dependent hydrogenase.
     
 0.916
SYN_02615
Cytochrome c-type protein.
  
 
 0.915
SYN_00143
Rhodanese-related sulfurtransferase.
    
 0.907
SYN_02220
NAD/FAD binding domain, oxidoreductase.
     
 0.904
SYN_00446
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 
 0.903
SYN_01253
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 
 0.903
SYN_02058
4Fe-4S binding protein.
  
  
 0.868
SYN_00604
Formate dehydrogenase iron-sulfur subunit; Cytochrome b.
 
 
 0.867
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.