STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_01896Glutamine amidotransferases class-II. (315 aa)    
Predicted Functional Partners:
carB
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 0.997
SYN_00522
Phosphoribosylformylglycinamidine synthase; Glutamine amidotransferase domain.
  
 
 0.976
carB-2
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 
 0.949
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
  
 
 0.948
SYN_01630
Glutamate synthase (NADPH); Belongs to the glutamate synthase family.
    
 0.919
SYN_01628
Glutamine synthetase.
    
 0.914
SYN_02958
6-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase.
   
 
 0.912
pgi
Glucose-6-phosphate isomerase / glucose-6 phosphate 1-epimerase; Bifunctional.
    
 0.911
SYN_02923
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
    
 0.909
SYN_00606
Glutamate synthase (NADPH).
  
 
 0.907
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.