Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SYN_01290 | SYN_02164 | SYN_01290 | SYN_02164 | Copper-exporting ATPase. | Hypothetical membrane protein. | 0.481 |
SYN_02163 | SYN_02164 | SYN_02163 | SYN_02164 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). | Hypothetical membrane protein. | 0.812 |
SYN_02163 | SYN_02165 | SYN_02163 | SYN_02165 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.784 |
SYN_02163 | SYN_02166 | SYN_02163 | SYN_02166 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.699 |
SYN_02163 | SYN_03220 | SYN_02163 | SYN_03220 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). | Hypothetical cytosolic protein. | 0.784 |
SYN_02163 | argH | SYN_02163 | SYN_02158 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). | Argininosuccinate lyase. | 0.442 |
SYN_02163 | dapA | SYN_02163 | SYN_02161 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.536 |
SYN_02163 | dapB | SYN_02163 | SYN_02162 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.723 |
SYN_02163 | lysA | SYN_02163 | SYN_02160 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.547 |
SYN_02164 | SYN_01290 | SYN_02164 | SYN_01290 | Hypothetical membrane protein. | Copper-exporting ATPase. | 0.481 |
SYN_02164 | SYN_02163 | SYN_02164 | SYN_02163 | Hypothetical membrane protein. | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). | 0.812 |
SYN_02164 | SYN_02165 | SYN_02164 | SYN_02165 | Hypothetical membrane protein. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.770 |
SYN_02164 | SYN_02166 | SYN_02164 | SYN_02166 | Hypothetical membrane protein. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.626 |
SYN_02164 | SYN_03220 | SYN_02164 | SYN_03220 | Hypothetical membrane protein. | Hypothetical cytosolic protein. | 0.770 |
SYN_02164 | argH | SYN_02164 | SYN_02158 | Hypothetical membrane protein. | Argininosuccinate lyase. | 0.402 |
SYN_02164 | dapA | SYN_02164 | SYN_02161 | Hypothetical membrane protein. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.511 |
SYN_02164 | dapB | SYN_02164 | SYN_02162 | Hypothetical membrane protein. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.690 |
SYN_02164 | lysA | SYN_02164 | SYN_02160 | Hypothetical membrane protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.511 |
SYN_02165 | SYN_02163 | SYN_02165 | SYN_02163 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). | 0.784 |
SYN_02165 | SYN_02164 | SYN_02165 | SYN_02164 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | Hypothetical membrane protein. | 0.770 |
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