STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_02625Hypothetical cytosolic protein. (219 aa)    
Predicted Functional Partners:
SYN_02626
Lipopolysaccharide N-acetylglucosaminyltransferase.
     0.985
SYN_02627
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 
 0.894
SYN_02628
Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
 
   
 0.832
SYN_02257
1,4-alpha-glucan branching enzyme.
  
 0.542
SYN_02624
Transcriptional regulator, MarR family.
     
 0.540
SYN_01131
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.461
SYN_00622
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] / trehalose 6-phosphate phosphatase; Bifunctional.
 
 
 0.457
SYN_01621
Hypothetical exported protein.
  
     0.452
SYN_02623
Peptidoglycan-specific endopeptidase, M23 family.
  
    0.447
SYN_02629
Mechanosensitive ion channel.
       0.426
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.