STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_02688UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. (403 aa)    
Predicted Functional Partners:
SYN_01131
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.901
SYN_02689
UDP-N-acetylglucosamine 4,6-dehydratase / UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; Bifunctional.
 
  
 0.886
SYN_02686
Undecaprenyl-phosphate galactosephosphotransferase.
  
 0.867
SYN_02687
O-acetyltransferase; Cell wall biosynthesis.
  
  
 0.795
SYN_02683
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.784
SYN_02677
Zinc-binding dehydrogenase.
  
  
 0.737
SYN_02682
Oxidoreductase.
  
  
 0.737
SYN_02866
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.637
SYN_02670
UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase; Bifunctional.
 
  
 0.618
SYN_02681
Glycosyltransferase.
 
  
 0.579
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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