Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SYN_00638 | SYN_02087 | Tungsten formylmethanofuran dehydrogenase subunit E. | Hypothetical cytosolic protein. | 0.484 |
SYN_00638 | SYN_02940 | Tungsten formylmethanofuran dehydrogenase subunit E. | HAD-superfamily hydrolase, subfamily IA, variant 3. | 0.503 |
SYN_00638 | SYN_02963 | Tungsten formylmethanofuran dehydrogenase subunit E. | Aminopeptidase. | 0.569 |
SYN_00958 | SYN_02963 | Hypothetical cytosolic protein. | Aminopeptidase. | 0.432 |
SYN_02087 | SYN_00638 | Hypothetical cytosolic protein. | Tungsten formylmethanofuran dehydrogenase subunit E. | 0.484 |
SYN_02087 | SYN_02963 | Hypothetical cytosolic protein. | Aminopeptidase. | 0.471 |
SYN_02940 | SYN_00638 | HAD-superfamily hydrolase, subfamily IA, variant 3. | Tungsten formylmethanofuran dehydrogenase subunit E. | 0.503 |
SYN_02940 | SYN_02963 | HAD-superfamily hydrolase, subfamily IA, variant 3. | Aminopeptidase. | 0.480 |
SYN_02962 | SYN_02963 | Hypothetical cytosolic protein. | Aminopeptidase. | 0.618 |
SYN_02962 | SYN_02964 | Hypothetical cytosolic protein. | Hypothetical cytosolic protein. | 0.425 |
SYN_02963 | SYN_00638 | Aminopeptidase. | Tungsten formylmethanofuran dehydrogenase subunit E. | 0.569 |
SYN_02963 | SYN_00958 | Aminopeptidase. | Hypothetical cytosolic protein. | 0.432 |
SYN_02963 | SYN_02087 | Aminopeptidase. | Hypothetical cytosolic protein. | 0.471 |
SYN_02963 | SYN_02940 | Aminopeptidase. | HAD-superfamily hydrolase, subfamily IA, variant 3. | 0.480 |
SYN_02963 | SYN_02962 | Aminopeptidase. | Hypothetical cytosolic protein. | 0.618 |
SYN_02963 | SYN_02964 | Aminopeptidase. | Hypothetical cytosolic protein. | 0.518 |
SYN_02964 | SYN_02962 | Hypothetical cytosolic protein. | Hypothetical cytosolic protein. | 0.425 |
SYN_02964 | SYN_02963 | Hypothetical cytosolic protein. | Aminopeptidase. | 0.518 |