STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFA32761.1N-acetylneuraminate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)    
Predicted Functional Partners:
OFA32764.1
CMP-N-acetlyneuraminic acid synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OFA32971.1
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.985
OFA32762.1
Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.979
OFA32763.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.970
kdsC
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
   
 0.945
OFA32970.1
Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.937
OFA32760.1
UDP-N-acetylglucosamine 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.730
OFA32765.1
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.593
OFA33422.1
UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.564
OFA32945.1
4-dihydromethyl-trisporate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.499
Your Current Organism:
Glaciecola punicea
NCBI taxonomy Id: 56804
Other names: ACAM 611, ATCC 700756, CIP 105817, G. punicea, marine psychrophile IC059, marine psychrophile IC067, marine psychrophile IC085, strain IC067
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