STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLUMA_CG000078CLUMA_CG000078, isoform A. (473 aa)    
Predicted Functional Partners:
CLUMA_CG020163
CLUMA_CG020163, isoform A.
   
 
 0.698
CLUMA_CG019462
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.673
CLUMA_CG014277
CLUMA_CG014277, isoform A.
   
 
 0.654
CLUMA_CG008683
CLUMA_CG008683, isoform A.
    
 
 0.623
CLUMA_CG005333
Sorting nexin; Involved in several stages of intracellular trafficking.
    
 
 0.621
CLUMA_CG015025
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.621
CLUMA_CG017149
CLUMA_CG017149, isoform A.
   
 
 0.598
CLUMA_CG019096
CLUMA_CG019096, isoform A.
    
 
 0.528
CLUMA_CG015193
CLUMA_CG015193, isoform A.
      
 0.489
CLUMA_CG012084
CLUMA_CG012084, isoform A.
      
 0.480
Your Current Organism:
Clunio marinus
NCBI taxonomy Id: 568069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.