STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLUMA_CG008504Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (321 aa)    
Predicted Functional Partners:
CLUMA_CG017702
CLUMA_CG017702, isoform A.
  
 
 0.947
CLUMA_CG018052
CLUMA_CG018052, isoform A; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.940
CLUMA_CG014187
Phosphoglycerate kinase.
    
 0.913
CLUMA_CG007742
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.909
CLUMA_CG009074
CLUMA_CG009074, isoform A.
    
  0.895
CLUMA_CG006885
CLUMA_CG006885, isoform A.
    
  0.889
CLUMA_CG007185
CLUMA_CG007185, isoform A.
     
 0.878
CLUMA_CG004555
CLUMA_CG004555, isoform A.
    
 0.835
CLUMA_CG017644
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.825
CLUMA_CG016476
CLUMA_CG016476, isoform A; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.792
Your Current Organism:
Clunio marinus
NCBI taxonomy Id: 568069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.