STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLUMA_CG011847CLUMA_CG011847, isoform A. (515 aa)    
Predicted Functional Partners:
CLUMA_CG017756
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family.
    
 0.549
CLUMA_CG002014
CLUMA_CG002014, isoform A.
    
 0.539
CLUMA_CG004323
CLUMA_CG004323, isoform A.
    
 0.539
CLUMA_CG003680
AP complex subunit beta.
    
  0.476
CLUMA_CG011020
CLUMA_CG011020, isoform A.
    
  0.468
CLUMA_CG018798
AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles.
    
  0.461
CLUMA_CG000771
CLUMA_CG000771, isoform A.
   
  0.451
CLUMA_CG014032
AP-1 complex subunit gamma.
    
  0.450
CLUMA_CG020112
CLUMA_CG020112, isoform A.
    
  0.449
CLUMA_CG021033
CLUMA_CG021033, isoform A.
    
 0.449
Your Current Organism:
Clunio marinus
NCBI taxonomy Id: 568069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.