STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLUMA_CG011983CLUMA_CG011983, isoform A. (1895 aa)    
Predicted Functional Partners:
CLUMA_CG011517
CLUMA_CG011517, isoform A.
   
 0.963
CLUMA_CG010934
CLUMA_CG010934, isoform A.
   
 0.949
CLUMA_CG005499
CLUMA_CG005499, isoform B.
    
 0.947
CLUMA_CG009625
CLUMA_CG009625, isoform A.
    
 0.910
CLUMA_CG008372
CLUMA_CG008372, isoform A.
   
 0.856
CLUMA_CG008377
CLUMA_CG008377, isoform A.
   
 0.856
CLUMA_CG000536
Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3.
   
 0.836
CLUMA_CG000537
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.820
CLUMA_CG010586
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.820
CLUMA_CG011595
CLUMA_CG011595, isoform A.
   
 0.820
Your Current Organism:
Clunio marinus
NCBI taxonomy Id: 568069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.