STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLUMA_CG014103Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)    
Predicted Functional Partners:
CLUMA_CG009225
CLUMA_CG009225, isoform A.
    
 0.997
CLUMA_CG018009
CLUMA_CG018009, isoform A.
    
 0.997
CLUMA_CG006969
CLUMA_CG006969, isoform A; Belongs to the DEAD box helicase family.
    
 0.996
CLUMA_CG020481
CLUMA_CG020481, isoform A.
    
 0.994
CLUMA_CG014972
CLUMA_CG014972, isoform A.
    
 0.993
CLUMA_CG012603
Small nuclear ribonucleoprotein Sm D3.
   
  0.986
CLUMA_CG010616
Small nuclear ribonucleoprotein G.
   
 0.984
CLUMA_CG004128
CLUMA_CG004128, isoform A.
   
  0.982
LSM8
U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.978
CLUMA_CG019561
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.978
Your Current Organism:
Clunio marinus
NCBI taxonomy Id: 568069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.