CLUMA_CG018949 protein (Clunio marinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CLUMA_CG018949

Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. Belongs to the peptidase S1 family. (1194 aa)

Predicted Functional Partners:

CLUMA_CG006329

0.998

CLUMA_CG006488

0.998

CLUMA_CG015074

0.998

CLUMA_CG018137

0.998

CLUMA_CG004464

0.997

CLUMA_CG007701

0.997

CLUMA_CG017490

0.908

CLUMA_CG013682

0.902

CLUMA_CG005199

0.898

CLUMA_CG005288

0.886

Your Current Organism:

Clunio marinus

NCBI taxonomy Id: 568069

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLUMA_CG004464	CLUMA_CG005199	A0A1J1HTR6	A0A1J1HW01	CLUMA_CG004464, isoform A.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.742
CLUMA_CG004464	CLUMA_CG005288	A0A1J1HTR6	A0A1J1HWA2	CLUMA_CG004464, isoform A.	CLUMA_CG005288, isoform A; Belongs to the STXBP/unc-18/SEC1 family.	0.705
CLUMA_CG004464	CLUMA_CG006329	A0A1J1HTR6	A0A1J1I1P0	CLUMA_CG004464, isoform A.	CLUMA_CG006329, isoform A.	0.998
CLUMA_CG004464	CLUMA_CG006488	A0A1J1HTR6	A0A1J1I3I7	CLUMA_CG004464, isoform A.	CLUMA_CG006488, isoform A.	0.997
CLUMA_CG004464	CLUMA_CG007701	A0A1J1HTR6	A0A1J1I1I0	CLUMA_CG004464, isoform A.	CLUMA_CG007701, isoform A.	0.997
CLUMA_CG004464	CLUMA_CG013682	A0A1J1HTR6	A0A1J1IJJ4	CLUMA_CG004464, isoform A.	CLUMA_CG013682, isoform A; Belongs to the syntaxin family.	0.857
CLUMA_CG004464	CLUMA_CG015074	A0A1J1HTR6	A0A1J1IQK4	CLUMA_CG004464, isoform A.	CLUMA_CG015074, isoform A.	0.995
CLUMA_CG004464	CLUMA_CG017490	A0A1J1HTR6	A0A1J1IXW2	CLUMA_CG004464, isoform A.	CLUMA_CG017490, isoform A.	0.845
CLUMA_CG004464	CLUMA_CG018137	A0A1J1HTR6	A0A1J1IZA0	CLUMA_CG004464, isoform A.	CLUMA_CG018137, isoform A.	0.997
CLUMA_CG004464	CLUMA_CG018949	A0A1J1HTR6	A0A1J1J0C9	CLUMA_CG004464, isoform A.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. Belongs to the peptidase S1 family.	0.997
CLUMA_CG005199	CLUMA_CG004464	A0A1J1HW01	A0A1J1HTR6	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	CLUMA_CG004464, isoform A.	0.742
CLUMA_CG005199	CLUMA_CG006329	A0A1J1HW01	A0A1J1I1P0	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	CLUMA_CG006329, isoform A.	0.819
CLUMA_CG005199	CLUMA_CG006488	A0A1J1HW01	A0A1J1I3I7	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	CLUMA_CG006488, isoform A.	0.745
CLUMA_CG005199	CLUMA_CG007701	A0A1J1HW01	A0A1J1I1I0	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	CLUMA_CG007701, isoform A.	0.795
CLUMA_CG005199	CLUMA_CG013682	A0A1J1HW01	A0A1J1IJJ4	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	CLUMA_CG013682, isoform A; Belongs to the syntaxin family.	0.999
CLUMA_CG005199	CLUMA_CG015074	A0A1J1HW01	A0A1J1IQK4	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	CLUMA_CG015074, isoform A.	0.894
CLUMA_CG005199	CLUMA_CG017490	A0A1J1HW01	A0A1J1IXW2	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	CLUMA_CG017490, isoform A.	0.675
CLUMA_CG005199	CLUMA_CG018137	A0A1J1HW01	A0A1J1IZA0	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	CLUMA_CG018137, isoform A.	0.756
CLUMA_CG005199	CLUMA_CG018949	A0A1J1HW01	A0A1J1J0C9	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. Belongs to the peptidase S1 family.	0.898
CLUMA_CG005288	CLUMA_CG004464	A0A1J1HWA2	A0A1J1HTR6	CLUMA_CG005288, isoform A; Belongs to the STXBP/unc-18/SEC1 family.	CLUMA_CG004464, isoform A.	0.705