STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001411745_00014Unannotated protein. (591 aa)    
Predicted Functional Partners:
GCA_001411745_02221
Unannotated protein.
    
  0.756
GCA_001411745_00684
Unannotated protein.
  
 0.744
GCA_001411745_02958
Unannotated protein.
  
 0.744
GCA_001411745_01251
Unannotated protein.
 
  
  0.686
GCA_001411745_02239
Unannotated protein.
   
  0.654
GCA_001411745_00147
Unannotated protein.
     
 0.606
GCA_001411745_01659
Unannotated protein.
   
  0.600
GCA_001411745_00013
Unannotated protein.
  
  0.594
GCA_001411745_02206
Unannotated protein.
  
   0.591
GCA_001411745_00218
Unannotated protein.
    
  0.572
Your Current Organism:
Psychrobacter glacincola
NCBI taxonomy Id: 56810
Other names: ACAM 483, ATCC 700754, CCUG 34874, CIP 105313, DSM 12194, P. glacincola, Psychrobacter endoglaciecola
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.