STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001411745_00154Unannotated protein. (341 aa)    
Predicted Functional Partners:
GCA_001411745_00153
Unannotated protein.
 
 
 0.958
GCA_001411745_02690
Unannotated protein.
 
 
 0.701
GCA_001411745_02646
Unannotated protein.
    
  0.652
GCA_001411745_01504
Unannotated protein.
  
 
 0.649
GCA_001411745_02650
Unannotated protein.
  
 
 0.602
GCA_001411745_02348
Unannotated protein.
     
 0.566
GCA_001411745_02350
Unannotated protein.
     
 0.561
GCA_001411745_02029
Unannotated protein.
 
0.546
GCA_001411745_01788
Unannotated protein.
   
 
 0.535
GCA_001411745_00261
Unannotated protein.
  
 
 0.532
Your Current Organism:
Psychrobacter glacincola
NCBI taxonomy Id: 56810
Other names: ACAM 483, ATCC 700754, CCUG 34874, CIP 105313, DSM 12194, P. glacincola, Psychrobacter endoglaciecola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.