STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001411745_00463Unannotated protein. (324 aa)    
Predicted Functional Partners:
GCA_001411745_01809
Unannotated protein.
  
     0.749
GCA_001411745_02256
Unannotated protein.
  
     0.730
GCA_001411745_00333
Unannotated protein.
  
     0.679
GCA_001411745_01254
Unannotated protein.
  
     0.672
GCA_001411745_01419
Unannotated protein.
  
     0.660
GCA_001411745_02191
Unannotated protein.
  
     0.657
GCA_001411745_00992
Unannotated protein.
  
     0.641
GCA_001411745_02190
Unannotated protein.
  
     0.635
GCA_001411745_01582
Unannotated protein.
  
     0.633
GCA_001411745_01468
Unannotated protein.
  
     0.616
Your Current Organism:
Psychrobacter glacincola
NCBI taxonomy Id: 56810
Other names: ACAM 483, ATCC 700754, CCUG 34874, CIP 105313, DSM 12194, P. glacincola, Psychrobacter endoglaciecola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.