STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_7917g4G-patch domain. (493 aa)    
Predicted Functional Partners:
BVC80_1793g14
Uncharacterized protein.
   
   0.802
BVC80_1551g27
Uncharacterized protein.
  
    0.480
BVC80_1409g8
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3.
      
 0.465
BVC80_1787g282
WD40 repeat.
      
 0.453
BVC80_1787g213
Small GTPase superfamily; Belongs to the small GTPase superfamily. Arf family.
   
  
 0.450
BVC80_633g19
Exo84_C domain-containing protein.
  
    0.425
BVC80_1527g8
Zinc finger protein.
      
 0.424
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.