STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9061g63Plant organelle RNA recognition domain. (252 aa)    
Predicted Functional Partners:
BVC80_1521g5
Uncharacterized protein.
  
     0.502
BVC80_8769g25
Uncharacterized protein.
  
     0.488
BVC80_399g7
Alpha crystallin/Hsp20 domain; Belongs to the small heat shock protein (HSP20) family.
  
     0.483
BVC80_53g5
Phytosulfokine.
  
     0.482
BVC80_8889g31
Pollen Ole e 1 allergen/extensin.
  
     0.481
BVC80_1741g160
Late embryogenesis abundant protein.
  
     0.480
BVC80_1561g9
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain.
  
     0.473
BVC80_1793g31
Uncharacterized protein.
  
     0.461
BVC80_1701g7
Uncharacterized protein.
  
     0.460
BVC80_1823g47
Smr protein/MutS2 C-terminal.
  
     0.456
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.