STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9063g9KOG2701 domain-containing protein. (422 aa)    
Predicted Functional Partners:
BVC80_1297g29
Uncharacterized protein.
  
 
 
 0.979
BVC80_8421g3
Vacuolar protein sorting-associated protein 26.
  
 
 
 0.934
BVC80_205g39
Vacuolar protein sorting-associated protein 35.
  
 
 
 0.918
BVC80_9097g128
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.895
BVC80_469g7
Interferon-related developmental regulator.
    
 
 0.686
BVC80_8915g21
Interferon-related developmental regulator.
    
 
 0.686
BVC80_1289g32
Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant.
    
 
 0.616
BVC80_7219g2
WASH1.
    
 
 0.511
BVC80_9101g234
WASH complex.
  
   
 0.499
BVC80_8925g5
WD40 repeat.
      
 0.481
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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