STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9063g79Glycosyl transferase. (708 aa)    
Predicted Functional Partners:
BVC80_8979g22
ERCC4 domain.
    
 0.790
BVC80_1751g138
Uncharacterized protein.
  
 0.764
BVC80_6797g1
Dual specificity phosphatase.
    
 0.758
BVC80_9051g59
N-acetylglucosaminyl phosphatidylinositol deacetylase.
  
 
 0.748
BVC80_1835g305
Dual specificity phosphatase.
    
 0.744
BVC80_8165g4
Uncharacterized protein.
  
 
 0.742
BVC80_459g21
Asparagine-linked glycosylation protein 1-like.
    
 0.739
BVC80_1787g180
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
   
 0.736
BVC80_1831g324
Ornithine/putrescine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.730
BVC80_1671g36
Alpha-D-phosphohexomutase superfamily.
   
 0.720
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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