Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVC80_1775g23 | BVC80_1833g136 | A0A200QNY8 | A0A200R6Z7 | 2Fe-2S ferredoxin-type domain; Belongs to the complex I 75 kDa subunit family. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.999 |
BVC80_1775g23 | BVC80_9065g106 | A0A200QNY8 | A0A200PNQ0 | 2Fe-2S ferredoxin-type domain; Belongs to the complex I 75 kDa subunit family. | Alpha/beta hydrolase fold-3. | 0.557 |
BVC80_1775g23 | BVC80_9099g94 | A0A200QNY8 | A0A200PVT5 | 2Fe-2S ferredoxin-type domain; Belongs to the complex I 75 kDa subunit family. | NmrA domain-containing protein. | 0.999 |
BVC80_1831g269 | BVC80_9065g106 | A0A200R7P6 | A0A200PNQ0 | Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family. | Alpha/beta hydrolase fold-3. | 0.547 |
BVC80_1833g136 | BVC80_1775g23 | A0A200R6Z7 | A0A200QNY8 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 2Fe-2S ferredoxin-type domain; Belongs to the complex I 75 kDa subunit family. | 0.999 |
BVC80_1833g136 | BVC80_9065g106 | A0A200R6Z7 | A0A200PNQ0 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Alpha/beta hydrolase fold-3. | 0.472 |
BVC80_1833g136 | BVC80_9099g94 | A0A200R6Z7 | A0A200PVT5 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | NmrA domain-containing protein. | 0.999 |
BVC80_1835g36 | BVC80_1837g213 | A0A200R4K4 | A0A200R3U4 | Leucine-rich repeat. | Tify. | 0.885 |
BVC80_1835g36 | BVC80_479g55 | A0A200R4K4 | A0A200Q7K0 | Leucine-rich repeat. | Leucine-rich repeat. | 0.895 |
BVC80_1835g36 | BVC80_9065g106 | A0A200R4K4 | A0A200PNQ0 | Leucine-rich repeat. | Alpha/beta hydrolase fold-3. | 0.556 |
BVC80_1835g36 | BVC80_9095g151 | A0A200R4K4 | A0A200PXR5 | Leucine-rich repeat. | Myc-type. | 0.450 |
BVC80_1835g36 | BVC80_9101g178 | A0A200R4K4 | A0A200QGR6 | Leucine-rich repeat. | Tify. | 0.885 |
BVC80_1837g213 | BVC80_1835g36 | A0A200R3U4 | A0A200R4K4 | Tify. | Leucine-rich repeat. | 0.885 |
BVC80_1837g213 | BVC80_479g55 | A0A200R3U4 | A0A200Q7K0 | Tify. | Leucine-rich repeat. | 0.931 |
BVC80_1837g213 | BVC80_9065g106 | A0A200R3U4 | A0A200PNQ0 | Tify. | Alpha/beta hydrolase fold-3. | 0.470 |
BVC80_1837g213 | BVC80_9095g151 | A0A200R3U4 | A0A200PXR5 | Tify. | Myc-type. | 0.973 |
BVC80_479g55 | BVC80_1835g36 | A0A200Q7K0 | A0A200R4K4 | Leucine-rich repeat. | Leucine-rich repeat. | 0.895 |
BVC80_479g55 | BVC80_1837g213 | A0A200Q7K0 | A0A200R3U4 | Leucine-rich repeat. | Tify. | 0.931 |
BVC80_479g55 | BVC80_9065g106 | A0A200Q7K0 | A0A200PNQ0 | Leucine-rich repeat. | Alpha/beta hydrolase fold-3. | 0.556 |
BVC80_479g55 | BVC80_9095g151 | A0A200Q7K0 | A0A200PXR5 | Leucine-rich repeat. | Myc-type. | 0.450 |
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