STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9065g106Alpha/beta hydrolase fold-3. (331 aa)    
Predicted Functional Partners:
BVC80_9095g151
Myc-type.
    
 0.570
BVC80_1775g23
2Fe-2S ferredoxin-type domain; Belongs to the complex I 75 kDa subunit family.
    
 0.557
BVC80_479g55
Leucine-rich repeat.
    
 0.556
BVC80_1835g36
Leucine-rich repeat.
    
 0.556
BVC80_9091g103
Glycoside hydrolase.
    
 0.547
BVC80_1831g269
Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family.
    
 0.547
BVC80_9099g94
NmrA domain-containing protein.
   
   0.487
BVC80_1833g136
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
   0.472
BVC80_9101g178
Tify.
   
 0.470
BVC80_1837g213
Tify.
   
 0.470
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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