STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9069g28Uncharacterized protein. (310 aa)    
Predicted Functional Partners:
BVC80_1101g21
Myc-type.
  
     0.516
BVC80_9047g37
RST domain of plant C-terminal.
  
     0.495
BVC80_1787g32
Uncharacterized protein.
  
     0.486
BVC80_1761g21
ATPase.
   
  0.484
BVC80_1671g24
Uncharacterized protein.
  
     0.483
BVC80_9029g28
Uncharacterized protein.
  
     0.473
BVC80_1837g422
B3 DNA binding domain.
  
 
   0.471
BVC80_1731g64
Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity; Belongs to the adenylate kinase family. AK6 subfamily.
     
 0.470
BVC80_9093g84
Uncharacterized protein.
  
 
   0.469
BVC80_9099g197
Rho termination factor.
  
     0.461
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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