STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1633g22SET domain. (549 aa)    
Predicted Functional Partners:
BVC80_8997g22
SET domain.
    
 0.909
BVC80_9081g57
SET domain.
     
 0.888
BVC80_9099g95
SET domain.
     
 0.888
BVC80_1313g31
SET domain.
   
 
 0.884
BVC80_1543g231
SANT/Myb domain.
   
 
 0.884
BVC80_9101g216
SET domain.
     
 0.876
BVC80_1587g38
SET domain.
     
 0.876
BVC80_6171g2
SRA-YDG.
     
 0.876
BVC80_1837g181
SET domain.
     
 0.876
BVC80_1769g67
SET domain.
     
 0.852
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.