STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1183g71Zinc finger protein. (316 aa)    
Predicted Functional Partners:
BVC80_9009g61
AP2/ERF domain.
  
     0.517
BVC80_1065g158
AP2/ERF domain.
  
     0.512
BVC80_747g14
AP2/ERF domain.
  
     0.511
BVC80_1183g41
AP2/ERF domain.
  
     0.510
BVC80_9087g35
AP2/ERF domain.
  
     0.506
BVC80_9101g221
AP2/ERF domain.
  
     0.501
BVC80_495g5
AP2/ERF domain.
  
     0.495
BVC80_1751g200
Uncharacterized protein.
  
     0.489
BVC80_1211g64
AP2/ERF domain.
  
     0.486
BVC80_9011g4
AP2/ERF domain.
  
     0.485
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.