STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1183g62Dormancyauxin associated. (166 aa)    
Predicted Functional Partners:
BVC80_8411g8
Uncharacterized protein.
  
 
   0.539
BVC80_1825g12
Uncharacterized protein.
  
     0.519
BVC80_8893g29
Cold acclimation WCOR413.
  
   
 0.511
BVC80_9065g100
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
     0.510
BVC80_9017g39
Uncharacterized protein family Cys-rich.
  
     0.506
BVC80_1837g23
Uncharacterized protein family Cys-rich.
  
     0.503
BVC80_8771g19
DUF3598 domain-containing protein.
  
     0.495
BVC80_633g20
Uncharacterized protein.
  
     0.487
BVC80_49g28
Uncharacterized protein.
  
     0.486
BVC80_9099g61
Mitochodrial transcription termination factor-related.
  
     0.483
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.