STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9087g19Alpha-galactosidase. (370 aa)    
Predicted Functional Partners:
BVC80_1835g697
Beta-hexosaminidase.
   
 
 0.898
BVC80_1721g16
Beta-galactosidase.
   
 
 0.893
BVC80_277g30
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
     
 0.890
BVC80_1795g47
Glycosyl hydrolases 36.
     
 0.774
BVC80_1543g212
Glycosyl hydrolases 36.
     
 0.774
BVC80_1543g211
Glycosyl hydrolases 36.
     
 0.774
BVC80_1543g214
Glycosyl hydrolases 36.
     
 0.774
BVC80_8685g21
Beta galactosidase small chain/ domain 5; Belongs to the glycosyl hydrolase 2 family.
     
 0.754
BVC80_9059g32
Cyclic nucleotide-binding domain.
     
 0.746
BVC80_9067g24
Glycosyl hydrolases 36.
     
 0.738
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.