STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9083g127AAA+ ATPase domain; Belongs to the AAA ATPase family. (608 aa)    
Predicted Functional Partners:
BVC80_1667g37
UBX.
   
 0.955
BVC80_1659g18
UBX domain-containing protein.
    
 0.942
BVC80_1741g60
UBX.
    
 0.937
BVC80_8987g15
Ovarian tumor.
   
 0.929
BVC80_8701g16
Glucosidase II beta subunit-like.
    
 0.923
BVC80_1835g73
Machado-Joseph disease protein MJD.
    
 0.918
BVC80_1395g103
Nuclear pore localization protein NPL4.
   
 0.898
BVC80_9003g50
Nuclear pore localization protein NPL4.
   
 0.898
BVC80_9035g35
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
   
 0.890
BVC80_8867g11
Transglutaminase-like.
    
 0.877
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.