STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9081g11Sterile alpha motif domain. (340 aa)    
Predicted Functional Partners:
BVC80_8779g14
F-box domain.
  
     0.464
BVC80_805g2
Zein-binding domain.
  
     0.452
BVC80_1169g35
Remorin.
  
     0.438
BVC80_1813g41
Transcription factor.
  
     0.434
BVC80_1431g55
F-box domain.
  
     0.433
BVC80_8961g31
Uncharacterized protein.
  
     0.431
BVC80_1361g10
Uncharacterized protein.
  
     0.430
BVC80_1831g299
Ribonuclease H domain.
  
     0.429
BVC80_7895g2
Uncharacterized protein.
  
     0.429
BVC80_1101g44
Phox/Bem1p.
  
     0.427
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.