STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_437g3Uncharacterized protein. (163 aa)    
Predicted Functional Partners:
BVC80_9037g40
Uncharacterized protein.
  
     0.500
BVC80_1825g87
Late embryogenesis abundant protein.
  
     0.494
BVC80_8987g18
Uncharacterized protein.
  
     0.485
BVC80_157g178
DUF632 domain-containing protein.
  
     0.479
BVC80_1689g40
Armadillo.
  
     0.478
BVC80_9079g77
Plant organelle RNA recognition domain.
  
     0.476
BVC80_8983g20
Uncharacterized protein.
  
     0.475
BVC80_1785g59
DOMON domain.
  
     0.474
BVC80_8779g3
Drought induced 19 protein-like.
  
     0.472
BVC80_9069g57
BURP domain.
  
     0.471
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.