STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_505g2Membrane attack complex component/perforin (MACPF) domain. (600 aa)    
Predicted Functional Partners:
BVC80_9099g233
ASCH domain.
    
 0.907
BVC80_1395g90
SNF2-related.
   
 0.796
BVC80_1519g17
Protein-tyrosine phosphatase.
    
 0.663
BVC80_847g9
Uncharacterized protein.
  
  0.600
BVC80_1835g178
Cytochrome c oxidase.
  
 
 0.587
BVC80_9033g43
Methyltransferase.
  
 
 0.581
BVC80_8271g6
Agenet-like domain.
   
 0.571
BVC80_8669g3
Protein translocase subunit SecA; Belongs to the SecA family.
   
 0.571
BVC80_1543g37
Uncharacterized protein.
   
 0.571
BVC80_1543g62
Protein translocase subunit SecA; Belongs to the SecA family.
   
 0.571
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.