STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1511g8SHQ1 protein. (416 aa)    
Predicted Functional Partners:
BVC80_143g20
A1 cistron-splicing factor.
    
 
 0.834
BVC80_1547g12
Translation elongation factor EFG.
    
 
 0.761
BVC80_9065g56
Uncharacterized protein.
    
   0.671
BVC80_9087g34
HEAT.
    
   0.671
BVC80_9075g46
Uncharacterized protein.
    
   0.671
BVC80_361g6
Prefoldin beta-like.
   
  
 0.591
BVC80_1591g59
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.537
BVC80_8743g10
Tetratricopeptide repeat-containing domain.
    
 
 0.520
BVC80_9067g56
JAB/MPN domain.
    
 
 0.517
BVC80_1543g237
INO80 complex subunit B-like conserved region.
   
 
 0.509
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.