STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9071g82Uncharacterized protein. (654 aa)    
Predicted Functional Partners:
BVC80_1773g10
F-box domain.
  
     0.462
BVC80_8935g27
Uncharacterized protein.
      
 0.461
BVC80_7077g3
F-box domain.
  
     0.461
BVC80_8739g23
F-box domain.
  
     0.460
BVC80_8869g33
F-box domain.
  
     0.450
BVC80_9089g75
F-box domain.
  
     0.447
BVC80_1591g10
Uncharacterized protein.
  
     0.447
BVC80_1609g15
F-box domain.
  
     0.444
BVC80_351g8
F-box domain.
  
     0.440
BVC80_8761g28
F-box domain.
  
     0.437
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.