STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9079g22Translation initiation factor 1A (eIF-1A); Belongs to the eIF-1A family. (145 aa)    
Predicted Functional Partners:
BVC80_8965g5
Ribosomal protein S12/S23.
  
 0.991
BVC80_1835g584
Ribosomal protein S12/S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.991
BVC80_209g54
Ribosomal protein S14.
  
 0.990
BVC80_9047g59
Ribosomal protein S14.
  
 0.990
BVC80_1473g11
Translation initiation factor 3.
   
 
 0.981
BVC80_517g11
Ribosomal protein S17; Belongs to the universal ribosomal protein uS17 family.
  
 0.979
BVC80_7337g5
Ribosomal protein S17; Belongs to the universal ribosomal protein uS17 family.
  
 0.979
BVC80_8961g10
Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs.
   
  0.978
BVC80_441g66
Ribosomal protein S19/S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.976
BVC80_1619g16
Ribosomal protein S19/S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.976
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.