STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9079g60Zinc_ribbon_12 domain-containing protein. (993 aa)    
Predicted Functional Partners:
BVC80_1719g15
Late embryogenesis abundant protein.
  
   
 0.625
BVC80_9023g4
Histone chaperone.
    
 0.613
BVC80_1065g115
GLE1-like.
    
 0.557
BVC80_1837g422
B3 DNA binding domain.
  
   0.548
BVC80_1835g107
Uncharacterized protein.
  
 
   0.548
BVC80_399g43
SANT/Myb domain.
  
 
  0.538
BVC80_8893g9
B3 DNA binding domain.
  
   0.531
BVC80_717g18
Uncharacterized protein.
  
 
  0.523
BVC80_1291g9
Zinc finger protein.
  
 
  0.513
BVC80_9099g126
Uncharacterized protein.
  
 
   0.512
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.