STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9079g88Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (227 aa)    
Predicted Functional Partners:
BVC80_8881g1
Trehalase.
  
 0.962
BVC80_9095g83
Glycosyl transferase.
 
  
  0.916
BVC80_1431g44
Glycosyl transferase.
 
  
  0.834
BVC80_9021g31
Glycosyl transferase.
 
  
 0.834
BVC80_7699g5
Glycosyl transferase.
 
  
  0.833
BVC80_1775g24
Glycosyl transferase.
 
  
  0.833
BVC80_8971g60
Glycosyl transferase.
 
  
  0.833
BVC80_8907g8
Glycosyl transferase.
 
  
 0.833
BVC80_1823g62
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.701
BVC80_1787g180
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
    
 0.663
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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