Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVC80_1181g12 | BVC80_1211g117 | A0A200PQC4 | A0A200Q3K6 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Peptidase M1. | 0.990 |
BVC80_1181g12 | BVC80_1263g18 | A0A200PQC4 | A0A200PV87 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Ubiquitin domain. | 0.992 |
BVC80_1181g12 | BVC80_1271g23 | A0A200PQC4 | A0A200PZZ7 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Transcription initiation factor TAFII31. | 0.962 |
BVC80_1181g12 | BVC80_1543g13 | A0A200PQC4 | A0A200R1I3 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | TAFII55 protein. | 0.974 |
BVC80_1181g12 | BVC80_1651g96 | A0A200PQC4 | A0A200PZE5 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Transcription initiation factor TFIID. | 0.928 |
BVC80_1181g12 | BVC80_1755g27 | A0A200PQC4 | A0A200QI28 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | TATA box binding protein associated factor (TAF). | 0.972 |
BVC80_1181g12 | BVC80_1787g8 | A0A200PQC4 | A0A200QU13 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Transcription initiation factor TFIID. | 0.957 |
BVC80_1181g12 | BVC80_8793g23 | A0A200PQC4 | A0A200PSW2 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | TAFII28-like protein. | 0.987 |
BVC80_1181g12 | BVC80_9047g36 | A0A200PQC4 | A0A200R2Y8 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Transcription initiation factor TFIID component TAF4. | 0.903 |
BVC80_1181g12 | BVC80_9047g37 | A0A200PQC4 | A0A200R320 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | RST domain of plant C-terminal. | 0.903 |
BVC80_1211g117 | BVC80_1181g12 | A0A200Q3K6 | A0A200PQC4 | Peptidase M1. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.990 |
BVC80_1211g117 | BVC80_1263g18 | A0A200Q3K6 | A0A200PV87 | Peptidase M1. | Ubiquitin domain. | 0.998 |
BVC80_1211g117 | BVC80_1271g23 | A0A200Q3K6 | A0A200PZZ7 | Peptidase M1. | Transcription initiation factor TAFII31. | 0.997 |
BVC80_1211g117 | BVC80_1543g13 | A0A200Q3K6 | A0A200R1I3 | Peptidase M1. | TAFII55 protein. | 0.998 |
BVC80_1211g117 | BVC80_1651g96 | A0A200Q3K6 | A0A200PZE5 | Peptidase M1. | Transcription initiation factor TFIID. | 0.991 |
BVC80_1211g117 | BVC80_1755g27 | A0A200Q3K6 | A0A200QI28 | Peptidase M1. | TATA box binding protein associated factor (TAF). | 0.998 |
BVC80_1211g117 | BVC80_1787g8 | A0A200Q3K6 | A0A200QU13 | Peptidase M1. | Transcription initiation factor TFIID. | 0.997 |
BVC80_1211g117 | BVC80_8793g23 | A0A200Q3K6 | A0A200PSW2 | Peptidase M1. | TAFII28-like protein. | 0.998 |
BVC80_1211g117 | BVC80_9047g36 | A0A200Q3K6 | A0A200R2Y8 | Peptidase M1. | Transcription initiation factor TFIID component TAF4. | 0.991 |
BVC80_1211g117 | BVC80_9047g37 | A0A200Q3K6 | A0A200R320 | Peptidase M1. | RST domain of plant C-terminal. | 0.991 |
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