STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_205g69Uncharacterized protein. (259 aa)    
Predicted Functional Partners:
BVC80_9007g4
Wall-associated receptor kinase galacturonan-binding domain.
  
     0.489
BVC80_2083g1
Nudix_hydro domain-containing protein.
  
     0.464
BVC80_8649g7
Uncharacterized protein.
  
     0.447
BVC80_695g4
Uncharacterized protein.
  
     0.444
BVC80_209g293
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.427
BVC80_7061g4
Zinc finger protein.
  
     0.426
BVC80_659g19
Uncharacterized protein.
  
     0.425
BVC80_1395g4
Uncharacterized protein.
  
     0.419
BVC80_8533g13
Uncharacterized protein.
  
     0.417
BVC80_1717g55
DUF295 domain-containing protein.
  
     0.412
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.