STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1431g53Spermidine/spermine synthases family; Belongs to the spermidine/spermine synthase family. (348 aa)    
Predicted Functional Partners:
BVC80_1823g39
Ornithine/DAP/Arg decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 0.944
BVC80_1489g7
Flavin amine oxidase.
    
 0.928
BVC80_1353g1
S-adenosylmethionine decarboxylase proenzyme.
    
 0.922
BVC80_8931g32
S-adenosylmethionine decarboxylase proenzyme.
    
 0.922
BVC80_7671g5
Flavin amine oxidase.
    
 0.915
BVC80_1265g27
Aminotransferase.
   
 0.883
BVC80_41g65
Aminotransferase.
   
 0.883
BVC80_9051g28
Ureohydrolase; Belongs to the arginase family.
  
 
 0.882
BVC80_1395g143
S-adenosylmethionine decarboxylase proenzyme.
    
 0.872
BVC80_1751g178
Carbon-nitrogen hydrolase.
  
 
 0.862
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.