STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1395g73CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (207 aa)    
Predicted Functional Partners:
BVC80_9095g40
AMP-dependent synthetase/ligase.
  
 0.978
BVC80_9077g116
Acyl transferase.
  
 0.966
BVC80_1587g19
GRIM-19.
   
 0.966
BVC80_8741g2
NADH-ubiquinone oxidoreductase.
   
 0.964
BVC80_9095g25
Zinc finger protein.
   
 0.963
BVC80_1833g136
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.963
BVC80_1117g16
4Fe-4S binding domain.
   
 0.953
BVC80_209g208
NADH:ubiquinone oxidoreductase-like; Belongs to the complex I 20 kDa subunit family.
   
 0.953
BVC80_9099g94
NmrA domain-containing protein.
   
 0.948
BVC80_9027g7
NADH:ubiquinone oxidoreductase.
   
 0.946
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.