STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1719g79SSXT. (206 aa)    
Predicted Functional Partners:
BVC80_1751g22
BAF250_C domain-containing protein.
    
 
 0.670
BVC80_8539g8
Actin-related protein; Belongs to the actin family.
    
 
 0.648
BVC80_209g85
WRC.
  
 
 
 0.614
BVC80_8747g11
WRC.
  
 
 
 0.611
BVC80_1679g38
SWIB/MDM2 domain.
    
 
 0.608
BVC80_237g4
SWIB/MDM2 domain.
    
 
 0.608
BVC80_1719g55
WRC.
  
 
 
 0.603
BVC80_9085g101
SANT/Myb domain.
   
 
 0.597
BVC80_1215g11
DnaJ domain.
    
 
 0.587
BVC80_1543g47
SNF5/SMARCB1/INI1.
    
 
 0.587
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.