STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1719g91Aldo/keto reductase. (266 aa)    
Predicted Functional Partners:
BVC80_9065g40
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
  
 
 0.909
BVC80_8881g8
Pyridoxamine 5'-phosphate oxidase.
   
 
 0.902
BVC80_1039g16
Pyridoxal phosphate (Active vitamin B6) biosynthesis.
    
 0.894
BVC80_9069g69
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.745
BVC80_157g168
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.745
BVC80_8577g2
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.744
BVC80_8189g6
Aminotransferase.
   
 
  0.689
BVC80_9079g72
WD40 repeat; Belongs to the WD repeat SEC13 family.
    
 0.687
BVC80_209g302
WD40 repeat; Belongs to the WD repeat SEC13 family.
    
 0.612
BVC80_9023g37
WD40 repeat; Belongs to the WD repeat SEC13 family.
    
 0.612
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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