STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8529g3AB hydrolase-1 domain-containing protein. (391 aa)    
Predicted Functional Partners:
BVC80_67g13
AMP-dependent synthetase/ligase.
    
 0.759
BVC80_213g11
Aminotransferase.
     
 0.694
BVC80_8127g12
Glutamine amidotransferase.
    
 0.685
BVC80_9095g40
AMP-dependent synthetase/ligase.
    
 0.649
BVC80_1395g87
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.634
BVC80_949g94
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.634
BVC80_157g125
Isochorismatase-like.
  
 0.622
BVC80_8591g5
Dehydrogenase.
  
 0.602
BVC80_8841g9
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.583
BVC80_8841g11
Acyl-CoA oxidase/dehydrogenase.
   
 0.583
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.