STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_441g115Ubiquitin E2 variant. (203 aa)    
Predicted Functional Partners:
BVC80_1769g21
EAP30.
    
 0.934
BVC80_1781g23
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.933
BVC80_155g13
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.933
BVC80_1835g311
Modifier of rudimentary.
    
 0.915
BVC80_9057g45
Modifier of rudimentary.
    
 0.915
BVC80_8729g8
FYVE zinc finger.
    
 0.904
BVC80_3g1
FYVE zinc finger.
    
 0.904
BVC80_379g81
Ribosomal protein S27a.
    
  0.859
BVC80_9043g13
Ribosomal protein S27a.
    
  0.859
BVC80_887g26
Ubiquitin domain.
    
  0.859
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.