Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVC80_1195g20 | BVC80_1751g121 | A0A200RCF2 | A0A200QHL6 | DNA helicase; Belongs to the MCM family. | Origin recognition complex. | 0.996 |
BVC80_1195g20 | BVC80_1769g105 | A0A200RCF2 | A0A200QTQ6 | DNA helicase; Belongs to the MCM family. | Cell division control protein; Belongs to the CDC6/cdc18 family. | 0.999 |
BVC80_1195g20 | BVC80_1803g3 | A0A200RCF2 | A0A200QR03 | DNA helicase; Belongs to the MCM family. | DNA helicase; Belongs to the MCM family. | 0.999 |
BVC80_1195g20 | BVC80_237g49 | A0A200RCF2 | A0A200RB55 | DNA helicase; Belongs to the MCM family. | Origin recognition complex. | 0.996 |
BVC80_1195g20 | BVC80_431g14 | A0A200RCF2 | A0A200PT63 | DNA helicase; Belongs to the MCM family. | DNA helicase; Belongs to the MCM family. | 0.999 |
BVC80_1195g20 | BVC80_441g155 | A0A200RCF2 | A0A200Q4K5 | DNA helicase; Belongs to the MCM family. | Protein kinase domain; Belongs to the protein kinase superfamily. | 0.899 |
BVC80_1195g20 | BVC80_6751g1 | A0A200RCF2 | A0A200PZK3 | DNA helicase; Belongs to the MCM family. | Mini-chromosome maintenance; Belongs to the MCM family. | 0.999 |
BVC80_1195g20 | BVC80_9099g159 | A0A200RCF2 | A0A200PVX3 | DNA helicase; Belongs to the MCM family. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.999 |
BVC80_1195g20 | BVC80_9099g241 | A0A200RCF2 | A0A200PW36 | DNA helicase; Belongs to the MCM family. | CDT1 Geminin-binding domain-like. | 0.999 |
BVC80_1195g20 | MCM7 | A0A200RCF2 | A0A200PWG7 | DNA helicase; Belongs to the MCM family. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.999 |
BVC80_1751g121 | BVC80_1195g20 | A0A200QHL6 | A0A200RCF2 | Origin recognition complex. | DNA helicase; Belongs to the MCM family. | 0.996 |
BVC80_1751g121 | BVC80_1769g105 | A0A200QHL6 | A0A200QTQ6 | Origin recognition complex. | Cell division control protein; Belongs to the CDC6/cdc18 family. | 0.997 |
BVC80_1751g121 | BVC80_1803g3 | A0A200QHL6 | A0A200QR03 | Origin recognition complex. | DNA helicase; Belongs to the MCM family. | 0.997 |
BVC80_1751g121 | BVC80_237g49 | A0A200QHL6 | A0A200RB55 | Origin recognition complex. | Origin recognition complex. | 0.998 |
BVC80_1751g121 | BVC80_431g14 | A0A200QHL6 | A0A200PT63 | Origin recognition complex. | DNA helicase; Belongs to the MCM family. | 0.977 |
BVC80_1751g121 | BVC80_441g155 | A0A200QHL6 | A0A200Q4K5 | Origin recognition complex. | Protein kinase domain; Belongs to the protein kinase superfamily. | 0.899 |
BVC80_1751g121 | BVC80_6751g1 | A0A200QHL6 | A0A200PZK3 | Origin recognition complex. | Mini-chromosome maintenance; Belongs to the MCM family. | 0.986 |
BVC80_1751g121 | BVC80_9099g159 | A0A200QHL6 | A0A200PVX3 | Origin recognition complex. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.997 |
BVC80_1751g121 | BVC80_9099g241 | A0A200QHL6 | A0A200PW36 | Origin recognition complex. | CDT1 Geminin-binding domain-like. | 0.986 |
BVC80_1751g121 | MCM7 | A0A200QHL6 | A0A200PWG7 | Origin recognition complex. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.996 |
page 1 of 6