STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1429g10Peptidase C1A; Belongs to the peptidase C1 family. (183 aa)    
Predicted Functional Partners:
BVC80_1959g1
Peptidase C1A.
 
     0.532
BVC80_1065g26
Peptidase C1A; Belongs to the peptidase C1 family.
 
     0.507
BVC80_717g6
WD40 repeat.
     
 0.502
BVC80_209g302
WD40 repeat; Belongs to the WD repeat SEC13 family.
    
  0.478
BVC80_9023g37
WD40 repeat; Belongs to the WD repeat SEC13 family.
    
  0.478
BVC80_887g57
Peptidase C1A; Belongs to the peptidase C1 family.
  
0.473
BVC80_857g18
Peptidase C1A; Belongs to the peptidase C1 family.
  
0.457
BVC80_9017g10
Saposin-like type B.
   
 
 0.456
BVC80_1837g47
Saposin-like type B.
   
 
 0.456
BVC80_1195g17
Peptidase C1A; Belongs to the peptidase C1 family.
  
0.456
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.