STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_7959g6Phloem protein 2-like. (326 aa)    
Predicted Functional Partners:
BVC80_1313g59
Remorin.
  
 
   0.533
BVC80_9101g139
Pollen Ole e 1 allergen/extensin.
  
 
  0.531
BVC80_157g82
Cyclic nucleotide-binding domain.
    
 0.528
BVC80_1825g76
Remorin.
  
 
   0.521
BVC80_8655g3
Myc-type.
  
  0.500
BVC80_645g87
Uncharacterized protein.
  
     0.499
BVC80_9101g254
Uncharacterized protein.
  
     0.497
BVC80_1689g14
F-box domain.
  
     0.497
BVC80_659g19
Uncharacterized protein.
  
 
   0.496
BVC80_7963g6
Dynamin central domain.
  
 
  0.494
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.