STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8717g3Uncharacterized protein. (82 aa)    
Predicted Functional Partners:
BVC80_1831g89
Pollen Ole e 1 allergen/extensin.
  
 
  0.592
BVC80_157g82
Cyclic nucleotide-binding domain.
    
 0.528
BVC80_399g7
Alpha crystallin/Hsp20 domain; Belongs to the small heat shock protein (HSP20) family.
  
     0.510
BVC80_9007g39
Uncharacterized protein.
  
 
   0.501
BVC80_1501g3
Uncharacterized protein.
  
 
  0.493
BVC80_9007g35
Uncharacterized protein.
  
 
   0.493
BVC80_8713g6
Aminotransferase-like.
  
  0.489
BVC80_8549g12
Uncharacterized protein.
  
 
   0.475
BVC80_8399g9
Uncharacterized protein.
  
     0.469
BVC80_8759g1
Uncharacterized protein family.
  
     0.463
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.