STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1381g14Uncharacterized protein. (463 aa)    
Predicted Functional Partners:
BVC80_1315g20
DNA-repair protein.
  
 
 0.743
BVC80_1267g1
Polyketide cyclase SnoaL-like domain.
   
 
  0.689
BVC80_1211g76
Uncharacterized protein.
   
 
  0.689
BVC80_7981g6
Uncharacterized protein.
  
 0.641
BVC80_8477g7
Endonuclease/exonuclease/phosphatase.
  
 0.641
BVC80_8889g14
Uncharacterized protein.
  
 0.641
BVC80_1113g2
SAP domain.
  
 0.641
BVC80_8213g1
Uncharacterized protein.
  
 0.641
BVC80_1803g23
Uncharacterized protein.
  
 0.641
BVC80_1307g12
Uncharacterized protein.
  
 0.641
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.